STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proXGlycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
KZB68249.1
Glycine betaine/L-proline ABC transporter ATP-binding protein; With ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
KZB68250.1
Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
KZB68253.1
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
choV
Choline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.963
KZB68252.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.963
KZB65645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.955
KZB65644.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
choW
Choline ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
KZB61808.1
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.857
KZB68247.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.793
Your Current Organism:
Thalassospira lucentensis
NCBI taxonomy Id: 168935
Other names: CECT 5390, DSM 14000, T. lucentensis, Thalassospira lucentensis Lopez-Lopez et al. 2002, strain QMT2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.