STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB66897.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
KZB66896.1
Tricarboxylic transport TctB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
KZB66895.1
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.946
KZB66598.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.863
KZB66928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.862
KZB60579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.861
KZB66887.1
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.858
KZB68981.1
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.848
KZB66889.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.698
KZB66926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.695
KZB66893.1
Ammonia monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.633
Your Current Organism:
Thalassospira lucentensis
NCBI taxonomy Id: 168935
Other names: CECT 5390, DSM 14000, T. lucentensis, Thalassospira lucentensis Lopez-Lopez et al. 2002, strain QMT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.