STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269985_02466Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_001269985_02469
Unannotated protein.
 
    0.891
GCA_001269985_02464
Unannotated protein.
 
     0.821
GCA_001269985_02468
Unannotated protein.
 
     0.803
GCA_001269985_00008
Unannotated protein.
  
    0.795
GCA_001269985_02470
Unannotated protein.
 
  
 0.795
GCA_001269985_02667
Unannotated protein.
  
     0.774
GCA_001269985_04610
Unannotated protein.
  
    0.762
GCA_001269985_01240
Unannotated protein.
  
     0.758
GCA_001269985_02467
Unannotated protein.
       0.756
GCA_001269985_02491
Unannotated protein.
  
    0.748
Your Current Organism:
Pseudoalteromonas sp. 520P1
NCBI taxonomy Id: 1690037
Other names: P. sp. '520P1 No. 423', Pseudoalteromonas sp. '520P1 No. 423'
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.