STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269985_03257Unannotated protein. (83 aa)    
Predicted Functional Partners:
GCA_001269985_02504
Unannotated protein.
 
 0.989
GCA_001269985_02174
Unannotated protein.
    
  0.850
GCA_001269985_03258
Unannotated protein.
 
     0.840
GCA_001269985_03259
Unannotated protein.
       0.787
GCA_001269985_04671
Unannotated protein.
 
  
 0.732
GCA_001269985_02505
Unannotated protein.
 
  
  0.726
GCA_001269985_02503
Unannotated protein.
 
 
 0.640
GCA_001269985_01594
Unannotated protein.
  
     0.635
GCA_001269985_02506
Unannotated protein.
 
  
 0.624
GCA_001269985_03256
Unannotated protein.
       0.620
Your Current Organism:
Pseudoalteromonas sp. 520P1
NCBI taxonomy Id: 1690037
Other names: P. sp. '520P1 No. 423', Pseudoalteromonas sp. '520P1 No. 423'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.