STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS28526.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
AMS28524.1
Preprotein translocase subunit SecF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.722
AMS28527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.637
AMS28523.1
Preprotein translocase subunit SecD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
AMS28525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
AMS30048.1
Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AMS28522.1
Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
AMS28521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.428
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.