STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS28865.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
AMS29345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.963
AMS28864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.748
AMS29806.1
Peptide deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.702
AMS28890.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.687
AMS28866.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
AMS28463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.598
AMS30496.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.577
gpmA
Phosphoglyceromutase; 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.558
AMS29655.1
Glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.457
AMS29604.1
Flagellar basal-body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.418
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.