STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS28891.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
AMS30795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.991
AMS28892.1
DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
AMS29424.1
DNA polymerase IV; Involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
AMS29863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
AMS30839.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.611
AMS28250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
AMS29528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
AMS30127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
AMS31084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
AMS28974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.519
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.