STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS29001.1Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)    
Predicted Functional Partners:
AMS28634.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS28988.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS28991.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS28993.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS28995.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AMS28996.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AMS28997.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS28998.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
AMS29000.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS29002.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.