STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS29529.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
AMS29342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.777
AMS29399.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
AMS30690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.615
AMS30693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.615
AMS30694.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.615
AMS28706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.615
AMS30737.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.509
AMS30787.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.508
AMS28649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.479
AMS29896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.476
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.