STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS30409.1Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)    
Predicted Functional Partners:
AMS30589.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.980
AMS31175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.796
AMS30378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
AMS29623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.598
AMS29187.1
acetyl-CoA synthetase; Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.562
gltA
Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.530
AMS30408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.529
AMS30407.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
AMS28269.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.507
astD
A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.507
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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