STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS32278.1Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family. (336 aa)    
Predicted Functional Partners:
AMS32280.1
Chitin deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMS32277.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
AMS32279.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
AMS32297.1
2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
AMS33696.1
Bacteriochlorophyll/chlorophyll a synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
bchN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
 
 0.990
bchB
Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
 
 0.984
chlL
Protochlorophyllide oxidoreductase; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
 
0.954
AMS32283.1
Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family.
 
  
 0.933
AMS32284.1
Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
  
 0.906
Your Current Organism:
Betaproteobacteria bacterium UKL132
NCBI taxonomy Id: 1690485
Other names: B. bacterium UKL13-2, Betaproteobacteria bacterium UKL13-2
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