STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN15052.1Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1189 aa)    
Predicted Functional Partners:
OAN15947.1
Rifampin ADP-ribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
OAN15973.1
Hpt protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.917
OAN15053.1
Signal recognition particle-docking protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.904
OAN15946.1
SMC-Scp complex subunit ScpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.877
OAN14377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.764
OAN13969.1
IMP dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.737
OAN15055.1
Signal recognition particle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.733
OAN15034.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.730
OAN15932.1
Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.727
OAN16096.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.718
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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