STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN15965.1CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
OAN15968.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
OAN15967.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.898
OAN15966.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.896
OAN15932.1
Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.884
OAN16323.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.788
OAN15964.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OAN15934.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.702
OAN16346.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.659
OAN10297.1
SNARE associated Golgi family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.642
OAN14926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.622
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.