STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN16235.1DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)    
Predicted Functional Partners:
OAN12694.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.960
OAN15865.1
Repressor LexA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.950
OAN12894.1
DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.845
OAN14760.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.842
OAN15931.1
DNA recombination/repair protein RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.807
OAN14773.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.720
OAN16157.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.714
OAN09975.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.676
OAN13959.1
DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.676
OAN14921.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.631
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.