STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN12771.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)    
Predicted Functional Partners:
OAN12331.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.942
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.912
OAN10053.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.900
OAN10180.1
F0F1 ATP synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.897
OAN10060.1
Ribosomal protein L7Ae-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.890
OAN15117.1
50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.887
OAN10181.1
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
OAN15032.1
Catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.883
OAN10179.1
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.873
OAN10036.1
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.873
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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