STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN12225.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)    
Predicted Functional Partners:
OAN14906.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.976
OAN14907.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
OAN15984.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
OAN14908.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
OAN15983.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
OAN14909.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
nikC
Nickel ABC transporter permease subunit NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.893
OAN15357.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.881
OAN15615.1
Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.881
OAN15358.1
Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.876
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.