STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN10068.1Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. (56 aa)    
Predicted Functional Partners:
OAN14602.1
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
OAN10034.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
secA
Accessory Sec system translocase SecA2; Functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, [...]
    
 0.990
OAN14558.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.990
OAN10066.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.990
OAN12698.1
OxaA precursor; Involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.985
OAN10067.1
Transcription termination/antitermination protein NusG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.985
OAN15055.1
Signal recognition particle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.984
OAN15053.1
Signal recognition particle-docking protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.982
OAN10065.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.971
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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