STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN09980.1rRNA (cytidine-2'-O-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
OAN09978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.968
OAN09979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.875
OAN14833.1
Uroporphyrinogen III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.848
OAN09976.1
Stage 0 sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.820
OAN09973.1
dTMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.798
OAN09975.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.765
OAN09977.1
In Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.682
OAN09974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
OAN10014.1
Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
OAN15172.1
3-methyl-2-oxobutanoate hydroxymethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.602
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.