STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAT75997.1Proline-specific permease ProY; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
OAT75996.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
 
  
 0.740
OAT75998.1
Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.484
OAT78691.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.448
Your Current Organism:
Mangrovibacter phragmitis
NCBI taxonomy Id: 1691903
Other names: DSM 100250, KCTC 42580, M. phragmitis, Mangrovibacter phragmitis Behera et al. 2017, Mangrovibacter sp. MP23, strain MP23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.