STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001302245_02642Unannotated protein. (448 aa)    
Predicted Functional Partners:
GCA_001302245_02157
Unannotated protein.
 
 0.995
GCA_001302245_04464
Unannotated protein.
 
 0.991
GCA_001302245_01296
Unannotated protein.
 
 0.990
GCA_001302245_03998
Unannotated protein.
   
 0.953
GCA_001302245_04025
Unannotated protein.
 
 
 0.943
GCA_001302245_04630
Unannotated protein.
 
 0.935
GCA_001302245_03801
Unannotated protein.
  
 0.934
GCA_001302245_00239
Unannotated protein.
 
 
 0.929
GCA_001302245_03633
Unannotated protein.
  
 
 0.911
GCA_001302245_00058
Unannotated protein.
  
 0.907
Your Current Organism:
Chitinophagaceae bacterium PMP191F
NCBI taxonomy Id: 1691979
Other names: C. bacterium PMP191F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.