STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0007LacI-type transcriptional regulator. (336 aa)    
Predicted Functional Partners:
BMAGN_0338
Beta-glucoside PTS system EIIBCA.
  
 
 0.787
BMAGN_0723
LacI-type transcriptional regulator.
  
     0.774
BMAGN_0945
LacI-type transcriptional regulator.
  
     0.774
BMAGN_1018
LacI-type transcriptional regulator.
  
     0.750
BMAGN_0817
Glutamate synthase, large subunit.
    
 
 0.743
BMAGN_0108
PTS phosphocarrier protein, HPr.
   
   0.648
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.546
pheT
Phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.546
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.546
BMAGN_0915
Inositol-5-monophosphate (IMP) dehydrogenase.
    
   0.495
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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