STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0089Hypothetical protein. (89 aa)    
Predicted Functional Partners:
BMAGN_0088
TadC-like protein.
 
   
 0.765
BMAGN_0090
TadE-like protein.
     
 0.761
BMAGN_0091
TadE-like protein.
     
 0.754
BMAGN_0086
Hypothetical protein.
     
 0.737
BMAGN_0092
Diacyl glycerol kinase.
       0.721
BMAGN_0087
Hypothetical protein.
     
 0.714
BMAGN_0093
DNA polymerase III subunits delta, gamma and tau.
       0.643
BMAGN_0085
Septum site-determining protein minD, TadZ-like protein.
 
     0.632
BMAGN_1280
Putative secreted protein.
  
     0.597
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.584
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.