Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BMAGN_0057 | BMAGN_0182 | Malate dehydrogenase. | Auxin Efflux Carrier (AEC). | 0.600 |
BMAGN_0181 | BMAGN_0182 | Signal peptidase I; Belongs to the peptidase S26 family. | Auxin Efflux Carrier (AEC). | 0.658 |
BMAGN_0182 | BMAGN_0057 | Auxin Efflux Carrier (AEC). | Malate dehydrogenase. | 0.600 |
BMAGN_0182 | BMAGN_0181 | Auxin Efflux Carrier (AEC). | Signal peptidase I; Belongs to the peptidase S26 family. | 0.658 |
BMAGN_0182 | BMAGN_0440 | Auxin Efflux Carrier (AEC). | NUDIX pyrophosphohydrolase. | 0.431 |
BMAGN_0182 | BMAGN_1083 | Auxin Efflux Carrier (AEC). | Hypothetical protein. | 0.465 |
BMAGN_0182 | BMAGN_1281 | Auxin Efflux Carrier (AEC). | Thioredoxin-like protein. | 0.423 |
BMAGN_0182 | BMAGN_1316 | Auxin Efflux Carrier (AEC). | Hypothetical protein. | 0.448 |
BMAGN_0440 | BMAGN_0182 | NUDIX pyrophosphohydrolase. | Auxin Efflux Carrier (AEC). | 0.431 |
BMAGN_1083 | BMAGN_0182 | Hypothetical protein. | Auxin Efflux Carrier (AEC). | 0.465 |
BMAGN_1083 | BMAGN_1281 | Hypothetical protein. | Thioredoxin-like protein. | 0.587 |
BMAGN_1083 | BMAGN_1316 | Hypothetical protein. | Hypothetical protein. | 0.481 |
BMAGN_1281 | BMAGN_0182 | Thioredoxin-like protein. | Auxin Efflux Carrier (AEC). | 0.423 |
BMAGN_1281 | BMAGN_1083 | Thioredoxin-like protein. | Hypothetical protein. | 0.587 |
BMAGN_1316 | BMAGN_0182 | Hypothetical protein. | Auxin Efflux Carrier (AEC). | 0.448 |
BMAGN_1316 | BMAGN_1083 | Hypothetical protein. | Hypothetical protein. | 0.481 |