STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0392Alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (578 aa)    
Predicted Functional Partners:
BMAGN_0397
Beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.922
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.898
BMAGN_0390
Alpha-glucuronidase.
 
   
 0.756
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.686
BMAGN_1019
Beta-galactosidase.
    
  0.538
BMAGN_0388
Putative sialic acid-specific 9-O-acetylesterase.
 
  
  0.494
BMAGN_1197
O-Glycosyl hydrolase.
 
 
 0.466
BMAGN_1198
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.419
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.