Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMAGN_0123 | BMAGN_0453 | BMAGN_0123 | BMAGN_0453 | Phosphoesterase. | Thiamin pyrophosphokinase. | 0.445 |
BMAGN_0123 | BMAGN_0732 | BMAGN_0123 | BMAGN_0732 | Phosphoesterase. | Hypothetical protein. | 0.695 |
BMAGN_0123 | BMAGN_0928 | BMAGN_0123 | BMAGN_0928 | Phosphoesterase. | Aminoglycoside phosphotransferase. | 0.548 |
BMAGN_0453 | BMAGN_0123 | BMAGN_0453 | BMAGN_0123 | Thiamin pyrophosphokinase. | Phosphoesterase. | 0.445 |
BMAGN_0453 | BMAGN_0454 | BMAGN_0453 | BMAGN_0454 | Thiamin pyrophosphokinase. | Translation Initiation Factor 3 (IF-3); Belongs to the IF-3 family. | 0.542 |
BMAGN_0453 | BMAGN_0719 | BMAGN_0453 | BMAGN_0719 | Thiamin pyrophosphokinase. | TenA-like transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.901 |
BMAGN_0453 | BMAGN_0732 | BMAGN_0453 | BMAGN_0732 | Thiamin pyrophosphokinase. | Hypothetical protein. | 0.430 |
BMAGN_0453 | BMAGN_0928 | BMAGN_0453 | BMAGN_0928 | Thiamin pyrophosphokinase. | Aminoglycoside phosphotransferase. | 0.416 |
BMAGN_0453 | BMAGN_0940 | BMAGN_0453 | BMAGN_0940 | Thiamin pyrophosphokinase. | ABC transporter permease. | 0.404 |
BMAGN_0453 | adk | BMAGN_0453 | BMAGN_0319 | Thiamin pyrophosphokinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.891 |
BMAGN_0453 | rpmI | BMAGN_0453 | BMAGN_0455 | Thiamin pyrophosphokinase. | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.418 |
BMAGN_0453 | thiE | BMAGN_0453 | BMAGN_0941 | Thiamin pyrophosphokinase. | Phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.761 |
BMAGN_0454 | BMAGN_0453 | BMAGN_0454 | BMAGN_0453 | Translation Initiation Factor 3 (IF-3); Belongs to the IF-3 family. | Thiamin pyrophosphokinase. | 0.542 |
BMAGN_0454 | rpmI | BMAGN_0454 | BMAGN_0455 | Translation Initiation Factor 3 (IF-3); Belongs to the IF-3 family. | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.991 |
BMAGN_0719 | BMAGN_0453 | BMAGN_0719 | BMAGN_0453 | TenA-like transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Thiamin pyrophosphokinase. | 0.901 |
BMAGN_0719 | thiE | BMAGN_0719 | BMAGN_0941 | TenA-like transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
BMAGN_0732 | BMAGN_0123 | BMAGN_0732 | BMAGN_0123 | Hypothetical protein. | Phosphoesterase. | 0.695 |
BMAGN_0732 | BMAGN_0453 | BMAGN_0732 | BMAGN_0453 | Hypothetical protein. | Thiamin pyrophosphokinase. | 0.430 |
BMAGN_0732 | BMAGN_0928 | BMAGN_0732 | BMAGN_0928 | Hypothetical protein. | Aminoglycoside phosphotransferase. | 0.587 |
BMAGN_0928 | BMAGN_0123 | BMAGN_0928 | BMAGN_0123 | Aminoglycoside phosphotransferase. | Phosphoesterase. | 0.548 |
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