STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0459GTP-binding elongation factor EF-Tu/EF-1A. (643 aa)    
Predicted Functional Partners:
BMAGN_0817
Glutamate synthase, large subunit.
   
  
 0.730
der
Bifunctional cytidylate kinase/ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
  
 0.668
BMAGN_0458
Chromosome partitioning protein parA.
       0.649
BMAGN_0460
Hypothetical protein.
       0.646
BMAGN_0461
Prephenate dehydratase.
       0.640
BMAGN_0462
Prephenate dehydrogenase.
       0.640
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.632
BMAGN_0567
ATP-dependent RNA helicase.
 
  
 0.630
BMAGN_0454
Translation Initiation Factor 3 (IF-3); Belongs to the IF-3 family.
  
 
 0.610
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
   
    0.607
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.