STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0465ABC transport, permease. (963 aa)    
Predicted Functional Partners:
BMAGN_0466
ABC transporter, ATP-binding protein.
 
  0.992
BMAGN_0553
ABC transporter, ATP-binding protein.
 
  0.941
BMAGN_0709
Macrolide efflux ABC transporter, ATP-binding protein.
 
  0.848
BMAGN_1399
Putative ABC transporter, ATP-binding protein.
 
  0.833
BMAGN_0048
ABC transporter, ATP-binding protein.
  
  0.816
BMAGN_0463
Hypothetical protein.
       0.789
xerC
Integrase/recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.720
BMAGN_0870
Alpha-mannosyl-phosphatidylinositol acyltransferase.
  
     0.691
BMAGN_0871
Glycosyltransferase.
  
     0.649
BMAGN_0502
Phosphatidylinositol alpha-mannosyltransferase.
  
     0.486
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.