STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0482Hypothetical protein. (691 aa)    
Predicted Functional Partners:
BMAGN_1236
Zinc-ribbon domain protein.
  
     0.702
BMAGN_0483
GTP pyrophosphokinase.
 
     0.619
BMAGN_0148
Cation diffusion facilitator transporter.
  
     0.539
BMAGN_1232
Hypothetical protein.
  
 
   0.538
BMAGN_0132
TetR-type transcriptional regulator.
  
     0.522
BMAGN_1396
Glutamine amidotransferase.
  
     0.517
BMAGN_0936
Alpha/beta hydrolase.
  
     0.495
BMAGN_0817
Glutamate synthase, large subunit.
     
 0.471
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
   0.461
BMAGN_1244
Fimbrial subunit-like protein.
  
     0.461
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.