STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0551ABC transporter, ATP-binding protein. (552 aa)    
Predicted Functional Partners:
BMAGN_0552
ABC transporter, permease.
 
  0.976
BMAGN_0422
Peptide ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.908
BMAGN_0753
Thiamin precursor ABC transporter, ATP-binding protein.
 
 
0.878
BMAGN_0727
ABC transporter, ATP-binding protein.
 
 
0.756
BMAGN_0553
ABC transporter, ATP-binding protein.
 
    
0.704
BMAGN_0731
ABC transporter, ATP-binding protein.
 
 
0.689
BMAGN_0550
Phosphomethylpyrimidine kinase; Belongs to the pyridoxine kinase family.
       0.496
BMAGN_0556
Two-component system, response regulator.
  
    0.484
BMAGN_0555
Two-component system, histidine kinase.
       0.480
BMAGN_0424
Peptide ABC transporter, permease.
 
 
  0.477
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.