STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0558Proline iminopeptidase. (445 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.932
BMAGN_0556
Two-component system, response regulator.
     
 0.787
BMAGN_0555
Two-component system, histidine kinase.
       0.786
BMAGN_0295
Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.784
BMAGN_1574
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.714
BMAGN_1046
Alcohol dehydrogenase containing zinc-binding domain.
    
  0.713
BMAGN_0339
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
      0.696
ychF
50S ribosome-binding GTPase; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
    0.684
BMAGN_0553
ABC transporter, ATP-binding protein.
       0.656
BMAGN_0560
L-serine dehydratase.
       0.616
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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