STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0669Putative MFS transporter. (826 aa)    
Predicted Functional Partners:
BMAGN_0671
Hypothetical protein.
 
     0.766
BMAGN_1249
Orotate phosphoribosyl transferase.
  
     0.763
BMAGN_1161
Hypothetical protein.
  
     0.759
BMAGN_0334
Hypothetical protein.
  
     0.756
BMAGN_0963
Hypothetical protein.
  
     0.745
BMAGN_0228
DivIVA protein possible involved in cell division.
  
     0.744
BMAGN_1279
Hypothetical protein.
  
     0.744
BMAGN_0680
LytR cell envelope-related transcriptional attenuator.
 
     0.738
BMAGN_0604
Hypothetical protein.
 
     0.736
BMAGN_0343
Dipeptidylaminopeptidase/acylaminoacyl- peptidase.
  
     0.732
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.