STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_0925Glycoprotease M22 family. (275 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.999
BMAGN_0926
Putative P-loop hydrolase.
  
 0.998
BMAGN_0924
Ribosomal-protein-alanine acetyltransferase.
  
 
 0.917
BMAGN_0927
DNA polymerase III subunit delta.
 
    0.746
BMAGN_0415
Sua5/YciO/YrdC family protein; Belongs to the SUA5 family.
 
  
 0.658
BMAGN_1164
ATP-dependent DNA helicase.
 
    0.549
BMAGN_0205
biotin-(acetyl-CoA)-carboxylase.
  
    0.492
BMAGN_1595
ComA protein.
 
     0.475
leuS
Leucyl-tRNA synthetase LeuS; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.471
BMAGN_1503
Hypothetical protein.
  
     0.453
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.