STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1014Oligopeptide ABC transporter permease OppB. (326 aa)    
Predicted Functional Partners:
BMAGN_1015
Oligopeptide ABC transporter permease OppC.
 
 
 0.998
BMAGN_1013
Oligopeptide ABC transporter substrate-binding protein OppA.
  0.997
BMAGN_1016
Oligopeptide ABC transporter ATP-binding protein OppD.
 
 
 0.996
BMAGN_1017
Oligopeptide ABC transporter ATP-binding protein OppF.
 
  0.995
BMAGN_0422
Peptide ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
BMAGN_0471
Glutathione ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.971
BMAGN_0470
Glutathione ABC transporter, permease.
 
 0.934
BMAGN_0421
Peptide ABC transporter, ATP-binding protein.
 
 0.891
BMAGN_1261
ABC transporter, solute-binding protein.
  0.883
BMAGN_0425
Peptide ABC transporter, solute-binding protein.
  0.837
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.