STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1035Phosphoglycerol transferase. (691 aa)    
Predicted Functional Partners:
BMAGN_0981
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
     0.522
BMAGN_1034
Esterase.
 
     0.501
BMAGN_0204
Hypothetical protein.
  
     0.496
BMAGN_0111
Phosphatidylethanolamine-binding protein.
  
     0.493
BMAGN_1211
Translation elongation factor.
  
    0.473
BMAGN_0955
DivIVA protein.
  
     0.447
BMAGN_1503
Hypothetical protein.
  
     0.444
BMAGN_1029
YbiR-like transporter.
  
     0.441
BMAGN_0634
Hypothetical protein.
  
     0.419
BMAGN_0917
Putatice ABC transporter, Sugar Solute-Binding Protein.
  
     0.416
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.