STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1092NADH-flavin reductase. (208 aa)    
Predicted Functional Partners:
BMAGN_1095
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.668
BMAGN_1094
Uncharacterized protein; Putative Type I restriction-modification system specificity (S) subunit of unknown recognition sequence.
  
    0.643
BMAGN_1093
Putative O-acetyl-ADP-ribose deacetylase.
       0.626
BMAGN_1091
HxlR-like transcriptional regulator.
  
    0.625
BMAGN_1096
Putative DNA primase (DnaG).
       0.499
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.