STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1105Formyl-CoA transferase; Belongs to the CoA-transferase III family. (440 aa)    
Predicted Functional Partners:
BMAGN_0646
Oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
 
 
 0.896
BMAGN_0647
Auxin efflux carrier family protein.
 
  
 0.792
sucD
Succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
  0.739
sucC
Succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
  0.726
BMAGN_1076
Hypothetical protein.
  
     0.622
BMAGN_0695
L-2,3-butanediol dehydrogenase/acetoin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.504
BMAGN_0701
Phospholipase B-like protein.
  
     0.493
BMAGN_1490
3-hydroxyacyl-CoA dehydrogenase.
 
   
 0.417
BMAGN_0332
Riboflavin kinase/FMN adenylyltransferase.
   
 
  0.414
BMAGN_1104
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase.
       0.406
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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