STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1139ErfK/YbiS/YcfS/YnhG protein. (537 aa)    
Predicted Functional Partners:
pyrG
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.670
BMAGN_0101
Bifunctional protein transglycosylase/transpeptidase.
  
   
 0.479
BMAGN_1323
Transpeptidase, penicillin-binding protein.
  
   
 0.467
BMAGN_1140
Putative Type I restriction (R) subunit of unknown recognition sequence; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.466
BMAGN_0880
Hypothetical protein.
  
     0.463
BMAGN_0139
Ribokinase.
  
     0.436
BMAGN_0968
Hypothetical protein.
  
   
 0.419
BMAGN_0730
Aminotransferase.
  
     0.415
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
   
 0.406
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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