STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1141Uncharacterized protein; Putative Type I restriction-modification system N6-adenine DNA methyltransferase (M) subunit of unknown recognition sequence. (536 aa)    
Predicted Functional Partners:
BMAGN_1143
Putative Type I specificity (S) subunit of unknown recognition sequence.
 
 0.984
BMAGN_1140
Putative Type I restriction (R) subunit of unknown recognition sequence; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.980
BMAGN_1144
Putative Type I specificity (S) subunit of unknown recognition sequence.
 
 
 0.961
BMAGN_1588
Putative Type I restriction (R) subunit of unknown recognition sequence.
 
 
 0.929
BMAGN_1095
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.904
BMAGN_1094
Uncharacterized protein; Putative Type I restriction-modification system specificity (S) subunit of unknown recognition sequence.
 
 
 0.884
BMAGN_1585
Methylase_S domain-containing protein; Putative Type I restriction-modification system specificity (S) subunit of unknown recognition sequence.
 
   0.871
BMAGN_1142
Putative Type IV methyl-directed restriction enzyme of unknown recognition sequence.
 
  
 0.868
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
   0.620
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
   0.493
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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