STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMAGN_1220Triacylglycerol lipase. (662 aa)    
Predicted Functional Partners:
BMAGN_1219
Hypothetical protein.
       0.792
BMAGN_0683
Hypothetical protein.
  
 0.768
BMAGN_0137
Hypothetical protein.
  
 
   0.713
BMAGN_0486
Cell division protein FtsK.
    
   0.676
BMAGN_0600
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family).
    
   0.676
BMAGN_0186
Hypothetical protein.
  
  0.619
BMAGN_0510
Hypothetical protein.
  
  0.619
BMAGN_1044
PE-PGRS family protein.
  
 0.619
BMAGN_0446
RNA polymerase sigma-70 factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
    
  0.598
BMAGN_0045
Hypothetical protein.
  
     0.575
Your Current Organism:
Bifidobacterium magnum
NCBI taxonomy Id: 1692
Other names: AS 1.2189, ATCC 27540, B. magnum, BCRC 14676, CCRC 14676, CCRC:14676, CCUG 34987, DSM 20222, HAMBI 569, LMG 11591, LMG:11591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.