STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI40_011450S ribosomal protein L28. (78 aa)    
Predicted Functional Partners:
rpsN
30S ribosomal protein S14.
 
 
 0.996
rpmF
50S ribosomal protein L32.
 
 
 0.995
rpsF
30S ribosomal protein S6.
 
 
 0.995
rpsO
30S ribosomal protein S15.
  
 
 0.994
AKI40_4501
30S ribosomal protein S18.
 
 
 0.994
rplU
50S ribosomal protein L21.
  
 
 0.993
AKI40_0592
50S ribosomal protein L27.
  
 
 0.993
rpsP
30S ribosomal protein S16.
  
 
 0.993
AKI40_1235
50S ribosomal protein L19.
  
 
 0.993
rpsT
30S ribosomal protein S20.
  
 
 0.993
Your Current Organism:
Enterobacter sp. FY07
NCBI taxonomy Id: 1692238
Other names: E. sp. FY-07, Enterobacter sp. FY-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.