STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smpASmall protein A. (114 aa)    
Predicted Functional Partners:
AKI40_1273
Hypothetical protein.
  
 0.989
AKI40_4112
Outer membrane protein assembly factor yaeT.
  
 
 0.984
AKI40_1395
Lipoprotein, NlpB/DapX family.
  
 0.952
AKI40_3774
Outer membrane protein assembly factor yaeT.
  
 
 0.952
AKI40_1349
Serine/threonine protein kinase with quinoprotein alcohol dehydrogenase domain.
  
 
 0.940
AKI40_4228
LPS-assembly protein lptD.
  
  
 0.816
holA
DNA polymerase III subunit delta.
 
     0.804
AKI40_4482
Outer membrane protein assembly factor.
  
 
 0.799
ftsB
Cell division protein FtsB.
  
   
 0.780
AKI40_0560
ClpXP protease specificity-enhancing factor.
  
     0.769
Your Current Organism:
Enterobacter sp. FY07
NCBI taxonomy Id: 1692238
Other names: E. sp. FY-07, Enterobacter sp. FY-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.