STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNY04849.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
KNY06889.1
Flagellar hook capping protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.635
KNY08020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.635
flgK
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.635
KNY04850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
KNY04848.1
tRNA synthetase RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.501
ribA
GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
   
   0.488
KNY04851.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.475
Your Current Organism:
Microbacterium sp. GCS4
NCBI taxonomy Id: 1692239
Other names: M. sp. GCS4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.