STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMIN_0366Putative von Willebrand factor type A domain protein. (348 aa)    
Predicted Functional Partners:
BMIN_0367
Von Willebrand factor A.
 
     0.965
BMIN_0369
Hypothetical protein.
 
     0.962
BMIN_0370
Methanol dehydrogenase regulator.
 
     0.906
BMIN_0365
Cell surface elastin binding protein EbpS.
       0.853
BMIN_0368
Hypothetical protein.
       0.853
BMIN_0363
Esterase/lipase.
 
     0.828
BMIN_0361
Hypothetical protein.
 
     0.737
BMIN_0362
Adenylosuccinate lyase.
 
     0.735
BMIN_0904
ErfK/YbiS/YcfS/YnhG superfamily protein.
  
     0.588
BMIN_0360
DNA-binding protein HB1; Belongs to the bacterial histone-like protein family.
       0.553
Your Current Organism:
Bifidobacterium minimum
NCBI taxonomy Id: 1693
Other names: AS 1.2233, ATCC 27538, B. minimum, BCRC 14666, CCRC 14666, CCRC:14666, CCUG 34982, DSM 20102, JCM 5821, LMG 11592, LMG:11592
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