STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMIN_0638Oxidoreductase. (47 aa)    
Predicted Functional Partners:
BMIN_0631
Phosphate acetyltransferase.
    
 0.823
BMIN_0115
Aldehyde-alcohol dehydrogenase 2.
   
 0.766
BMIN_0116
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase.
   
 0.766
BMIN_0250
Lactoylglutathione lyase.
 
 0.603
BMIN_0646
Hydrolase, alpha/beta domain protein.
  
  0.599
BMIN_0906
Putative alpha beta hydrolase.
  
  0.599
BMIN_0873
2,5-didehydrogluconate reductase.
  
 
 0.570
BMIN_0934
Aldo/keto reductase family oxidoreductase.
  
 
 0.570
BMIN_0637
Hypothetical protein.
       0.543
BMIN_0665
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.515
Your Current Organism:
Bifidobacterium minimum
NCBI taxonomy Id: 1693
Other names: AS 1.2233, ATCC 27538, B. minimum, BCRC 14666, CCRC 14666, CCRC:14666, CCUG 34982, DSM 20102, JCM 5821, LMG 11592, LMG:11592
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