STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMIN_0992Type II secretion system protein, pilus assembly. (181 aa)    
Predicted Functional Partners:
BMIN_0990
Type II secretion system protein E.
  
  
 0.921
BMIN_0993
Hypothetical protein.
 
   
 0.862
BMIN_0991
Protein secretion system or pilus assembly related protein.
       0.793
BMIN_0989
Septum site determining protein.
       0.716
BMIN_0087
Hypothetical protein.
  
  
 0.669
BMIN_1377
Hypothetical protein.
  
     0.645
BMIN_1119
Hypothetical protein.
  
     0.644
BMIN_1374
Membrane spanning protein.
  
     0.636
BMIN_0372
Hypothetical protein.
  
     0.600
BMIN_0744
DivIVA domain repeat protein.
  
     0.598
Your Current Organism:
Bifidobacterium minimum
NCBI taxonomy Id: 1693
Other names: AS 1.2233, ATCC 27538, B. minimum, BCRC 14666, CCRC 14666, CCRC:14666, CCUG 34982, DSM 20102, JCM 5821, LMG 11592, LMG:11592
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.