STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMIN_1177ABC transporter. (617 aa)    
Predicted Functional Partners:
BMIN_1178
ABC transporter permease.
 
    
0.883
BMIN_1125
Sugars ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.750
pstB
Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.707
BMIN_0686
Glutamine ABC transporter, ATP-binding protein.
 
     
0.666
BMIN_0286
Amino acid ABC transporter, ATP-binding protein.
 
     
0.653
BMIN_0171
Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
     
0.638
BMIN_1179
TatD family hydrolase.
       0.534
BMIN_0294
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.524
BMIN_1451
ABC transporter ATP-binding protein.
  
  0.519
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.505
Your Current Organism:
Bifidobacterium minimum
NCBI taxonomy Id: 1693
Other names: AS 1.2233, ATCC 27538, B. minimum, BCRC 14666, CCRC 14666, CCRC:14666, CCUG 34982, DSM 20102, JCM 5821, LMG 11592, LMG:11592
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