STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ68322.1Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (339 aa)    
Predicted Functional Partners:
SHJ68371.1
Dipeptide transport system permease protein.
 0.996
SHJ68393.1
Dipeptide transport system permease protein.
 
 0.983
DppD
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.980
SHJ68414.1
Dipeptide transport system substrate-binding protein.
 
 0.957
SHJ68438.1
Dipeptide transport system substrate-binding protein.
 
 0.952
SHK12415.1
Dipeptide transport system substrate-binding protein.
 
 0.945
SHJ76955.1
Dipeptide transport system substrate-binding protein.
 
 0.933
SHJ77942.1
Peptide/nickel transport system permease protein.
 
 0.920
SHJ46134.1
Glutathione transport system permease protein.
 
 0.894
SHK58029.1
Peptide/nickel transport system permease protein.
 
 0.875
Your Current Organism:
Paraburkholderia terricola
NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.