STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK33534.1Amino acid ABC transporter membrane protein 1, PAAT family. (229 aa)    
Predicted Functional Partners:
SHK33476.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.989
SHK33505.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
0.978
SHK55764.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.968
SHK33273.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.966
SHK73076.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.959
SHJ53912.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.958
SHK22948.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.958
SHK43912.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.958
SHK55741.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
0.905
SHK55719.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  
  
 
0.901
Your Current Organism:
Paraburkholderia terricola
NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118
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