Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HemN | SHK89811.1 | SAMN05192548_1001128 | SAMN05192548_104413 | Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Outer membrane protein. | 0.671 |
SHJ46296.1 | SHJ63539.1 | SAMN05192548_1002129 | SAMN05192548_1004141 | Protein of unknown function. | Hypothetical protein. | 0.769 |
SHJ46296.1 | SHJ71432.1 | SAMN05192548_1002129 | SAMN05192548_1005160 | Protein of unknown function. | ATP synthase protein I. | 0.772 |
SHJ46296.1 | SHK04068.1 | SAMN05192548_1002129 | SAMN05192548_101231 | Protein of unknown function. | SnoaL-like domain-containing protein. | 0.772 |
SHJ46296.1 | SHK04663.1 | SAMN05192548_1002129 | SAMN05192548_101263 | Protein of unknown function. | Fatty acid desaturase. | 0.672 |
SHJ46296.1 | SHK19359.1 | SAMN05192548_1002129 | SAMN05192548_1015137 | Protein of unknown function. | Hypothetical protein. | 0.772 |
SHJ46296.1 | SHK73739.1 | SAMN05192548_1002129 | SAMN05192548_103562 | Protein of unknown function. | Hypothetical protein. | 0.770 |
SHJ46296.1 | SHK88462.1 | SAMN05192548_1002129 | SAMN05192548_104333 | Protein of unknown function. | Anti sigma-E protein, RseA. | 0.741 |
SHJ46296.1 | SHK89811.1 | SAMN05192548_1002129 | SAMN05192548_104413 | Protein of unknown function. | Outer membrane protein. | 0.653 |
SHJ63539.1 | SHJ46296.1 | SAMN05192548_1004141 | SAMN05192548_1002129 | Hypothetical protein. | Protein of unknown function. | 0.769 |
SHJ63539.1 | SHJ71432.1 | SAMN05192548_1004141 | SAMN05192548_1005160 | Hypothetical protein. | ATP synthase protein I. | 0.768 |
SHJ63539.1 | SHK04068.1 | SAMN05192548_1004141 | SAMN05192548_101231 | Hypothetical protein. | SnoaL-like domain-containing protein. | 0.767 |
SHJ63539.1 | SHK04663.1 | SAMN05192548_1004141 | SAMN05192548_101263 | Hypothetical protein. | Fatty acid desaturase. | 0.549 |
SHJ63539.1 | SHK19359.1 | SAMN05192548_1004141 | SAMN05192548_1015137 | Hypothetical protein. | Hypothetical protein. | 0.757 |
SHJ63539.1 | SHK73739.1 | SAMN05192548_1004141 | SAMN05192548_103562 | Hypothetical protein. | Hypothetical protein. | 0.770 |
SHJ63539.1 | SHK88462.1 | SAMN05192548_1004141 | SAMN05192548_104333 | Hypothetical protein. | Anti sigma-E protein, RseA. | 0.711 |
SHJ63539.1 | SHK89811.1 | SAMN05192548_1004141 | SAMN05192548_104413 | Hypothetical protein. | Outer membrane protein. | 0.519 |
SHJ71432.1 | SHJ46296.1 | SAMN05192548_1005160 | SAMN05192548_1002129 | ATP synthase protein I. | Protein of unknown function. | 0.772 |
SHJ71432.1 | SHJ63539.1 | SAMN05192548_1005160 | SAMN05192548_1004141 | ATP synthase protein I. | Hypothetical protein. | 0.768 |
SHJ71432.1 | SHK04068.1 | SAMN05192548_1005160 | SAMN05192548_101231 | ATP synthase protein I. | SnoaL-like domain-containing protein. | 0.773 |
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