STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH42198.1phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (296 aa)    
Predicted Functional Partners:
SEH42188.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.998
SEH42208.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.996
SEI18619.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.980
MlaD
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.961
SEI18616.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
  
 
0.909
SEI18627.1
Phospholipid transport system transporter-binding protein.
  
 0.888
SEH42219.1
Cholesterol transport system auxiliary component.
 
    0.879
SEH53614.1
ABC-type transporter Mla maintaining outer membrane lipid asymmetry, MlaC component.
  
 
 0.852
SEH60313.1
Phospholipid transport system substrate-binding protein.
  
 
 0.852
SEI18625.1
Phospholipid transport system substrate-binding protein.
  
 
 0.852
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.